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Titlebook: Computational Design of Ligand Binding Proteins; Barry L. Stoddard Book 2016 Springer Science+Business Media New York 2016 ligand-binding

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發(fā)表于 2025-3-21 16:40:04 | 只看該作者 |倒序?yàn)g覽 |閱讀模式
書目名稱Computational Design of Ligand Binding Proteins
編輯Barry L. Stoddard
視頻videohttp://file.papertrans.cn/233/232231/232231.mp4
概述Includes cutting-edge methods and protocols.Provide step-by-step detail essential for reproducible results.Contains key notes and implementation advice from the experts.Includes supplementary material
叢書名稱Methods in Molecular Biology
圖書封面Titlebook: Computational Design of Ligand Binding Proteins;  Barry L. Stoddard Book 2016 Springer Science+Business Media New York 2016 ligand-binding
描述.This volume provides acollection of protocols and approaches for the creation of novel ligand bindingproteins, compiled and described by many of today‘s leaders in the field ofprotein engineering. Chapters focus on?modeling protein ligand bindingsites, accurate modeling of protein-ligand conformational sampling, scoring ofindividual docked solutions, structure-based design program such as ROSETTA,protein engineering, and additional methodological approaches. Examples of applicationsinclude the design of metal-binding proteins and light-induced ligand bindingproteins, the creation of binding proteins that also display catalyticactivity, and the binding of larger peptide, protein, DNA and RNAligands.?Written in the highly successful?.Methods in MolecularBiology?.series format, chapters include introductions to theirrespective topics, lists of the necessary materials and reagents, step-by-step,readily reproducible laboratory protocols, and tips ontroubleshooting and avoidingknown pitfalls..
出版日期Book 2016
關(guān)鍵詞ligand-binding proteins; individual docked solutions; ROSETTA; protein engineering; metal-binding protei
版次1
doihttps://doi.org/10.1007/978-1-4939-3569-7
isbn_softcover978-1-4939-8080-2
isbn_ebook978-1-4939-3569-7Series ISSN 1064-3745 Series E-ISSN 1940-6029
issn_series 1064-3745
copyrightSpringer Science+Business Media New York 2016
The information of publication is updating

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沙發(fā)
發(fā)表于 2025-3-21 21:30:59 | 只看該作者
Zusammenfassung der Ergebnisse,eve this is the theozyme placement and enzyme design algorithms implemented in Rosetta Molecular Modeling Suite. Here, we illustrate how to use this software to recapitulate the placement of catalytic residues and ligand into a protein using a theozyme, protein scaffold, and catalytic constraints as input.
板凳
發(fā)表于 2025-3-22 04:07:47 | 只看該作者
Barry L. StoddardIncludes cutting-edge methods and protocols.Provide step-by-step detail essential for reproducible results.Contains key notes and implementation advice from the experts.Includes supplementary material
地板
發(fā)表于 2025-3-22 04:38:30 | 只看該作者
Methods in Molecular Biologyhttp://image.papertrans.cn/c/image/232231.jpg
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978-1-4939-8080-2Springer Science+Business Media New York 2016
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發(fā)表于 2025-3-22 22:00:11 | 只看該作者
Verschlüsselung und Substanz-Verzeichnisse–ligand interactions. However, most of the currently available computational techniques are affected by severe deficiencies in both protein and ligand conformational sampling as well as in the scoring of the obtained docking solutions. To overcome these limitations, we have recently developed Medusa
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發(fā)表于 2025-3-23 02:29:37 | 只看該作者
Die biologische Funktion der Steroidhormone,des, respectively. GalaxySite predicts ligands that may bind the input protein and generates complex structures of the protein with the predicted ligands from the protein structure given as input or predicted from the input sequence. GalaxyPepDock takes a protein structure and a peptide sequence as
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發(fā)表于 2025-3-23 08:14:29 | 只看該作者
Struktur und Nomenklatur der Steroide,for a particular target ligand are not available, artificial proteins can be computationally designed. We present a protocol based on RosettaLigand to redesign an existing protein pocket to bind a target ligand. Starting with a protein structure and the structure of the ligand, Rosetta can optimize
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