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Titlebook: Biomolecular Simulations; Methods and Protocol Luca Monticelli,Emppu Salonen Book 2013 Springer Science+Business Media New York 2013 Coarse

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發(fā)表于 2025-3-21 17:20:36 | 只看該作者 |倒序瀏覽 |閱讀模式
期刊全稱Biomolecular Simulations
期刊簡稱Methods and Protocol
影響因子2023Luca Monticelli,Emppu Salonen
視頻videohttp://file.papertrans.cn/189/188259/188259.mp4
發(fā)行地址Illustrates methods commonly used in molecular modeling of biological systesms.Provides step-by-step detail essential for reproducible results.Contains key notes and implementation advice from the exp
學(xué)科分類Methods in Molecular Biology
圖書封面Titlebook: Biomolecular Simulations; Methods and Protocol Luca Monticelli,Emppu Salonen Book 2013 Springer Science+Business Media New York 2013 Coarse
影響因子.Over the past 40 years the field of molecular simulations has evolved from picosecond studies of isolated macromolecules in vacuum to studies of complex, chemically heterogeneous biological systems consisting of millions of atoms, with the simulation time scales spanning up to milliseconds. In .Biomolecular Simulations: Methods and Protocols,. expert researchers illustrate many of the methods commonly used in molecular modelling of biological systems, including methods for electronic structure calculations, classical molecular dynamics simulations and coarse-grained techniques. A selection of advanced techniques and recent methodological developments, which rarely find coverage in traditional textbooks, is also introduced. .?.Written in the highly successful .Methods in Molecular Biology. series format, chapters include general introductions to well-established computational methodologies, applications to real-world biological systems, as well as practical tips and general protocols on carrying out biomolecular simulations. Special emphasis is placed on simulations of proteins, lipids, nucleic acids, and carbohydrates. Authoritative and practical, .Biomolecular Simulations: Method
Pindex Book 2013
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Book 2013es, applications to real-world biological systems, as well as practical tips and general protocols on carrying out biomolecular simulations. Special emphasis is placed on simulations of proteins, lipids, nucleic acids, and carbohydrates. Authoritative and practical, .Biomolecular Simulations: Method
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Enhanced Sampling Algorithmsand replica-exchange method, are described first. Both Monte Carlo and molecular dynamics versions of the algorithms are given. We then present various extensions of these three generalized-ensemble algorithms. The effectiveness of the methods is tested with short peptide and protein systems.
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Simulation Studies of the Mechanism of Membrane Transportersall membrane transporters use the widely-accepted “alternating access mechanism,” which ensures that the substrate is only accessible from one side of the membrane at a given time, but relies on complex and usually global protein conformational changes that differ for each family of membrane transpo
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