Titlebook: Algorithms and Methods in Structural Bioinformatics; Nurit Haspel,Filip Jagodzinski,Kevin Molloy Book 2022 The Editor(s) (if applicable) a

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https://doi.org/10.1007/978-3-540-71631-0logy—cryo-electron microscopy (cryo-EM). DeepTracer predicts atomic structures of protein including primary, secondary, tertiary and quaternary structure from cryo-EM maps. To make DeepTracer available and easy to use for researchers, we created a web server as a user-friendly front-end interface to

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https://doi.org/10.1007/978-3-031-05914-8Computational Biology; Structural Bioinformatics; Protein-protein Interactions; Algorithms in Bioinform

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Nurit Haspel,Filip Jagodzinski,Kevin MolloyWhile there are multiple bioinformatics textbooks, very few focus solely on structural bioinformatics.The book spans a broad range of current and challenging topics in Structural bioinformatics.The bo

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Explaining Small Molecule Binding Specificity with Volumetric Representations of Protein Binding Siric hindrance and electrostatic fields, collaborate to encourage chemical interactions between proteins and their preferred binding partners while colluding to discourage others. Deciphering this complex activity has been the focus of tremendous focus in structural biology. This chapter examines how

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Machine Learning-Based Approaches for Protein Conformational Exploration,protein that performs vital functions. Hence, investigating and interpreting protein dynamics as well as their structures can provide us with invaluable insights regarding how proteins perform their functions. In this chapter we survey both experimental and . methods used to study protein dynamics a

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Detection and Analysis of Amino Acid Insertions and Deletions,from them, remain rather unexplored areas of structural biology. Recent research endeavors have made it apparent that these kinds of structural variations have a stronger correlation with functional changes in the respective proteins compared to the other kinds of mutations. In this review article,