Titlebook: RNA Structure Determination; Methods and Protocol Douglas H. Turner,David H. Mathews Book 2016 Springer Science+Business Media New York 201

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書目名稱RNA Structure Determination影響因子(影響力)




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書目名稱RNA Structure Determination網(wǎng)絡(luò)公開度




書目名稱RNA Structure Determination網(wǎng)絡(luò)公開度學科排名




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書目名稱RNA Structure Determination被引頻次學科排名




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書目名稱RNA Structure Determination讀者反饋




書目名稱RNA Structure Determination讀者反饋學科排名

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Secondary Structure Prediction of Single Sequences Using RNAstructure, energy minimization, prediction of base pairing probabilities, prediction of structures composed of highly probably base pairs, and prediction of structures with pseudoknots. A user-friendly graphical user interface is provided, and this interface works on Windows, Apple OS X, and Linux. This chapt

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Prediction of Secondary Structures Conserved in Multiple RNA Sequences, much more accurate than predicting the structure for a single sequence. RNAstructure is a software package that includes the programs Dynalign, Multilign, TurboFold, and PARTS for predicting conserved RNA secondary structure. This chapter provides protocols for using these programs.

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,Predicting RNA–RNA Interactions Using RNAstructure,ause of the competition between intramolecular and intermolecular structure formation. A complete picture of RNA–RNA binding includes an understanding of single-stranded folding and binding site accessibility, and is strongly concentration-dependent. This chapter provides guidance for using RNAstruc

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Traditional Chemical Mapping of RNA Structure In Vitro and In Vivo,gands. The method monitors the reactivity of each nucleotide towards chemicals of various specificities reflecting the hydrogen bonding environment of each nucleotide within the RNA molecule. In addition, information can be obtained on the binding site of a ligand (noncoding RNAs, protein, metabolit

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High-Throughput Nuclease Probing of RNA Structures Using FragSeq,ultaneously. Such assays accelerate RNA structure analysis and provide researchers with new technologies to tackle biological questions on a transcriptome-wide scale. FragSeq is an experimental assay for transcriptome-wide RNA structure probing using RNA-Seq, coupled with data analysis tools that al

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Experiment-Assisted Secondary Structure Prediction with RNAstructure,age of enzymatic cleavage data, FMN cleavage data, traditional chemical modification reactivity data, and SHAPE reactivity data for secondary structure modeling. This chapter provides protocols for using experimental probing data with RNAstructure to restrain or constrain RNA secondary structure pre