Titlebook: Environmental Microbial Evolution; Methods and Protocol Haiwei Luo Book 2022 The Editor(s) (if applicable) and The Author(s), under exclusi

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https://doi.org/10.1007/978-3-030-00518-4tion process. Lacking fossil or other evidence about the past, ancestral states can be reconstructed. Three pieces of information are combined when reconstructing ancestral states: extant or known trait values (data); the evolutionary history, linking the species of interest (phylogeny); and the evo

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A Computational Protocol for Dating the Evolution of Cyanobacteria key to understanding these evolutionary events and thus has gained much interest to biologists and geobiologists. Recent development of the molecular dating approaches provides us an opportunity to assess the timeline of Cyanobacteria evolution based on relaxed clock models. The implementation of B

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Relative Time Inference Using Lateral Gene Transferst the recipient organism by providing useful coding sequences, such as antibiotic resistance genes or enzymes which expand the organism’s metabolic niche. For evolutionary biologists, LGTs have often been considered a nuisance because they complicate the reconstruction of the underlying species tree

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Estimating the Divergence Times of Alphaproteobacteria Based on Mitochondrial Endosymbiosis and Euka addition, many alphaproteobacterial lineages have established close association with eukaryotes. This makes Alphaproteobacteria a promising system to test the link between the emergence of ecologically important bacteria and related geological events and the co-evolution between symbiotic bacteria