Titlebook: Distributed and Sequential Algorithms for Bioinformatics; Kayhan Erciyes Textbook 2015 Springer International Publishing Switzerland 2015

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Clustering of Biological Sequencesh can be used for this purpose. There are a number of distributed algorithms for sequence clustering as we discuss. Four new algorithms and a general method for graph partitioning are also proposed which can be implemented in a distributed memory system conveniently.

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Epilogue The main future directions of research in bioinformatics, as we see it, will probably be along the same lines of investigation into efficient big data analysis methods including parallel/distributed algorithm implementations; and disease analysis together with more personal medication applications.

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Parallel and Distributed Computinglled and parallel processes must be synchronized as we discuss. We provide a brief review of POSIX threads which can be used for parallel processing. Distributed algorithms synchronize using messages; we show common structures of these algorithms and illustrate the widely used message passing interf

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String Algorithms them and survey a number of reported parallel/distributed approaches to build these structures. A suffix array is a compact representation of the suffixes of a string as we discuss. We sketch a possible implementation of a reported study of distributed suffix array construction.