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Titlebook: Computational Methods in Systems Biology; 6th International Co Monika Heiner,Adelinde M. Uhrmacher Conference proceedings 2008 Springer-Ver

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Successful Science and Engineering Teachingival or fecundity. We define potential fitness correlates, describe methods for automatically measuring them from simulations and implement a simple clock using the Gillespie stochastic simulation algorithm within StochKit. We determine what fraction of examined mutations with small effects on the r
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A Partial Granger Causality Approach to Explore Causal Networks Derived From Multi-parameter Data,the participating entities. We also demonstrate the ability of our method to deal with latent and exogenous variables present in the system. We then applied this method to a highly replicated gene expression microarray time series data to infer causal influences between gene expression events involv
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The Distribution of Mutational Effects on Fitness in a Simple Circadian Clock,ival or fecundity. We define potential fitness correlates, describe methods for automatically measuring them from simulations and implement a simple clock using the Gillespie stochastic simulation algorithm within StochKit. We determine what fraction of examined mutations with small effects on the r
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