Titlebook: Application and Integration of Omics-powered Diagnostics in Clinical and Public Health Microbiology; Jacob Moran-Gilad,Yael Yagel Book 202

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Lopatinski??–?apiro Boundary Conditionscrobiology routine diagnostics and continues to replace conventional and biochemical methods for bacterial species identification. Several studies have shown that MALDI-TOF MS is a reliable, reproducible and cost-effective method for rapid bacterial and fungal species identification at the species l

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Lopatinski??–?apiro Boundary Conditionsein content of bacteria for identification, has been widely used in clinical practice. The wide distribution of this technology in microbiology labs around the world allows the exploration of novel uses of this method for other purposes such as identifying antibiotic resistance and rapid identificat

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Lopatinski??–?apiro Boundary Conditionsn several areas related to food and water microbiology. Compared to other biophysical methods such as mass spectrometry, the method Fourier Transform Infrared spectroscopy has been receiving less attention and was mainly displaced by genotypic based approaches since the 1990s. However, several studi

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https://doi.org/10.1007/978-3-030-88670-7isms. The introduction of high-throughput?sequencing (HTS) technologies to various applications in microbiology has the potential to promote the field of forensic microbiology making it a valuable tool in the evaluation of a crime scene. In this chapter, we will thoroughly review what is known on fo

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Whole-Genome Sequencing for Bacterial Virulence Assessment,gy, the use of WGS to assess the content in genes encoding virulence factors as well as in mutations associated to virulence brings new perspectives to the field. In a clinical setting, WGS should be considered only (i) when the results may change the therapy or the clinical management, or (ii) for