標題: Titlebook: Comparative Genomics; International Worksh Craig E. Nelson,Stéphane Vialette Conference proceedings 2008 Springer-Verlag Berlin Heidelberg [打印本頁] 作者: Conformist 時間: 2025-3-21 19:49
書目名稱Comparative Genomics影響因子(影響力)
書目名稱Comparative Genomics影響因子(影響力)學科排名
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度學科排名
書目名稱Comparative Genomics被引頻次
書目名稱Comparative Genomics被引頻次學科排名
書目名稱Comparative Genomics年度引用
書目名稱Comparative Genomics年度引用學科排名
書目名稱Comparative Genomics讀者反饋
書目名稱Comparative Genomics讀者反饋學科排名
作者: 轉(zhuǎn)換 時間: 2025-3-21 21:16
Sozioanalyse in der p?dagogischen Arbeite opportunity to identify cases of gene loss, the best method to do this with is unclear. A number of methods to identify gene losses rely on the presence of a pseudogene for each loss. If genes are completely or largely removed from the genome, however, such methods will fail to identify these case作者: 追逐 時間: 2025-3-22 02:01
Sozioanalyse in der p?dagogischen Arbeitransposition accounts for at least half of all predicted duplicate genes in these genomes, with tandem and interspersed duplicates comprising the other half. Estimation of the evolutionary rates in each class revealed greater rate asymmetry between retrotransposed and interspersed segmental duplicat作者: 遠足 時間: 2025-3-22 04:37
https://doi.org/10.1007/978-3-662-67136-8ariation. For many years the origin of functional gene duplicates was assumed to be whole or partial genome duplication events, but recently retrotransposition has also been shown to contribute new functional protein coding genes and siRNA’s. Here we present a method for the identification and class作者: Hemiparesis 時間: 2025-3-22 10:43
https://doi.org/10.1007/978-3-662-67136-8n about the functional interdependencies between sets of genes and cellular functions, about their complementary and backup relations, and more generally, for answering fundamental questions about the evolution of biological systems..Orthologs that exhibit strong signal of co-evolution in part of th作者: COM 時間: 2025-3-22 16:54
https://doi.org/10.1007/978-3-642-34541-8consider parsimony analysis over numerical characters, where knowing the feature values at terminal taxa allows one to infer ancestral features, namely, by minimizing the total number of changes on the edges using continuous-valued distance measures. In particular, we show that ancestral reconstruct作者: COM 時間: 2025-3-22 19:25
https://doi.org/10.1007/978-3-642-34541-8airwise distance measure, .., for genomes separated by less than approximately 0.5 mismatches/nucleotide. We have implemented the computation of .. based on enhanced suffix arrays in the program ., which is freely available from .. The software is applied to genomes obtained from three sets of taxa:作者: 使殘廢 時間: 2025-3-22 21:22 作者: escalate 時間: 2025-3-23 03:34
Programmbeschreibung und Anwendung,d using their differences to locate HGT events. Another approach is based on augmenting a species tree into a phylogenetic network to improve the fitness of the evolution of the gene sequence data under an optimization criterion, such as maximum parsimony (MP). One major problem with the first appro作者: Prognosis 時間: 2025-3-23 07:47
Christian Reutlinger,Andrea Thoma we found that the existing HPV groups are monophyletic and that the high-risk carcinogenicity taxa are usually clustered together. Then, we present a new algorithm for analyzing the information content of multiple sequence alignments in relation to epidemiologic carcinogenicity data to identify reg作者: NIB 時間: 2025-3-23 12:44 作者: Dysplasia 時間: 2025-3-23 17:15
,?Soziolinguistik‘: eine erste Ann?herung, scenario that does not break families of common intervals (groups of genes co-localized in both genomes). Such scenarios are called perfect, and generalize the notion of perfect reversal scenarios. While perfect sorting by reversals is NP-hard if the family of common intervals is nested, we show th作者: 妨礙 時間: 2025-3-23 18:31 作者: 改變 時間: 2025-3-24 01:09 作者: modest 時間: 2025-3-24 02:39
,Fünfte Vorlesung: Organisation,. However, recombination analyses and other methods for gene mapping often fail to resolve the ordering of some pairs of neighboring markers, thereby leading to sets of markers ambiguously mapped to the same position. Each individual map is thus a partial order defined on the set of markers, and can作者: 一個攪動不安 時間: 2025-3-24 09:20
Sechste Vorlesung: Gesellschaft,errations in cancer. These aberrations, which result in abnormally structured genomes, became a hallmark of cancer. Many studies give evidence to the connection between chromosomal alterations and aberrant genes involved in the carcinogenesis process. An important problem in the analysis of cancer g作者: overweight 時間: 2025-3-24 14:01 作者: 繁榮中國 時間: 2025-3-24 16:22 作者: 易于出錯 時間: 2025-3-24 19:53
,Fünfte Vorlesung: Organisation,e multiplicity of solutions to the genome halving process. Using the genome of a related species (the outgroup) to guide the halving of a WGD descendant attenuates this problem. We investigate a battery of techniques for further improvement, including an unbiased version of the guided genome halving作者: 拒絕 時間: 2025-3-25 02:06
Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations,ting a random reconciliation, and combinatorial operators and algorithms to explore the space of all possible reconciliations between a gene tree and a species tree in optimal time. We apply these algorithms to simulated data.作者: 輕浮思想 時間: 2025-3-25 05:40 作者: 修飾 時間: 2025-3-25 08:20 作者: 喊叫 時間: 2025-3-25 12:28 作者: deciduous 時間: 2025-3-25 18:16 作者: 鎮(zhèn)痛劑 時間: 2025-3-25 23:47
Verzeichnis der Projektmitarbeiterting a random reconciliation, and combinatorial operators and algorithms to explore the space of all possible reconciliations between a gene tree and a species tree in optimal time. We apply these algorithms to simulated data.作者: Intercept 時間: 2025-3-26 03:23 作者: 防御 時間: 2025-3-26 05:49
Estimating the Relative Contributions of New Genes from Retrotransposition and Segmental Duplicatioise to many more duplicated sequences over time. While the chance that retrotransposed copies become functional is much lower than that of their segmentally duplicated counterparts, the higher rate of retrotransposition events leads to nearly equal contributions of new genes by each mechanism.作者: ANTH 時間: 2025-3-26 10:29
Discovering Local Patterns of Co-evolution,he fact that often co-evolution is local..In this work, we describe a new set of biological problems that are related to finding patterns of local co-evolution. We discuss their computational complexity and design algorithms for solving them. These algorithms outperform other bi-clustering methods a作者: 防銹 時間: 2025-3-26 15:11 作者: 使腐爛 時間: 2025-3-26 17:48 作者: 古老 時間: 2025-3-27 00:36 作者: 打谷工具 時間: 2025-3-27 02:08
Sorting Cancer Karyotypes by Elementary Operations,orming a normal karyotype into a given (abnormal) cancerous karyotype. Under certain assumptions, we prove a lower bound for the elementary distance, and present a polynomial-time 3-approximation algorithm. We applied our algorithm to karyotypes from the Mitelman database, which records cancer karyo作者: relieve 時間: 2025-3-27 07:18
Sozioanalyse in der p?dagogischen Arbeitalso had evidence for transcription. Though our results suggest that pseudogene-based methods for finding gene losses will miss a large proportion of these events, we discuss the dependence of these conclusions on the divergence times among the species considered.作者: –scent 時間: 2025-3-27 12:24
https://doi.org/10.1007/978-3-662-67136-8ise to many more duplicated sequences over time. While the chance that retrotransposed copies become functional is much lower than that of their segmentally duplicated counterparts, the higher rate of retrotransposition events leads to nearly equal contributions of new genes by each mechanism.作者: Comedienne 時間: 2025-3-27 16:59
https://doi.org/10.1007/978-3-662-67136-8he fact that often co-evolution is local..In this work, we describe a new set of biological problems that are related to finding patterns of local co-evolution. We discuss their computational complexity and design algorithms for solving them. These algorithms outperform other bi-clustering methods a作者: CHIP 時間: 2025-3-27 21:35
Programmbeschreibung und Anwendung,rap values of the gene tree branches. Second, we present an integrative method to speed up the approaches for augmenting species trees into phylogenetic networks..We conducted data analysis and performance study of our methods on a data set of 20 genes from the . mitochondrial genome, in which Jeffr作者: addict 時間: 2025-3-27 22:02
https://doi.org/10.1007/978-3-476-05861-4nts to the edges of the phylogenetic tree, such that the pairwise scenarios are reflected on the paths of the tree. It is shown that . can automatically infer the events and the ancestral gene orders for realistic biological examples of mitochondrial gene orders. In an analysis of gene order data fo作者: Horizon 時間: 2025-3-28 03:11
,Fünfte Vorlesung: Organisation,le markers by using two successive heuristics for minimizing two distances on the species tree: the breakpoint distance, and the Kemeny distance. We apply our algorithms to the plant species represented in the Gramene database, and we evaluate the simplified maps we obtained.作者: 擔心 時間: 2025-3-28 07:45 作者: Cirrhosis 時間: 2025-3-28 13:02
Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations,ting a random reconciliation, and combinatorial operators and algorithms to explore the space of all possible reconciliations between a gene tree and a species tree in optimal time. We apply these algorithms to simulated data.作者: sorbitol 時間: 2025-3-28 16:21
Limitations of Pseudogenes in Identifying Gene Losses,e opportunity to identify cases of gene loss, the best method to do this with is unclear. A number of methods to identify gene losses rely on the presence of a pseudogene for each loss. If genes are completely or largely removed from the genome, however, such methods will fail to identify these case作者: Permanent 時間: 2025-3-28 21:31
Duplication Mechanism and Disruptions in Flanking Regions Influence the Fate of Mammalian Gene Duplransposition accounts for at least half of all predicted duplicate genes in these genomes, with tandem and interspersed duplicates comprising the other half. Estimation of the evolutionary rates in each class revealed greater rate asymmetry between retrotransposed and interspersed segmental duplicat作者: Aspiration 時間: 2025-3-29 00:36 作者: Flustered 時間: 2025-3-29 06:08
Discovering Local Patterns of Co-evolution,n about the functional interdependencies between sets of genes and cellular functions, about their complementary and backup relations, and more generally, for answering fundamental questions about the evolution of biological systems..Orthologs that exhibit strong signal of co-evolution in part of th作者: 頑固 時間: 2025-3-29 10:55
Ancestral Reconstruction by Asymmetric Wagner Parsimony over Continuous Characters and Squared Parsconsider parsimony analysis over numerical characters, where knowing the feature values at terminal taxa allows one to infer ancestral features, namely, by minimizing the total number of changes on the edges using continuous-valued distance measures. In particular, we show that ancestral reconstruct作者: humectant 時間: 2025-3-29 11:24 作者: 內(nèi)向者 時間: 2025-3-29 18:45 作者: Fresco 時間: 2025-3-29 21:59
Integrating Sequence and Topology for Efficient and Accurate Detection of Horizontal Gene Transfer,d using their differences to locate HGT events. Another approach is based on augmenting a species tree into a phylogenetic network to improve the fitness of the evolution of the gene sequence data under an optimization criterion, such as maximum parsimony (MP). One major problem with the first appro作者: ostracize 時間: 2025-3-30 02:22
An Evolutionary Study of the Human Papillomavirus Genomes, we found that the existing HPV groups are monophyletic and that the high-risk carcinogenicity taxa are usually clustered together. Then, we present a new algorithm for analyzing the information content of multiple sequence alignments in relation to epidemiologic carcinogenicity data to identify reg作者: miniature 時間: 2025-3-30 06:30
An Algorithm for Inferring Mitogenome Rearrangements in a Phylogenetic Tree, parsimonious assignment of genomic rearrangement events to the edges of the given phylogenetic tree. An algorithm called algorithm . (tree rearrangement explorer) is proposed for solving this problem heuristically. . is based on an extended version of algorithm . (common interval rearrangement expl作者: overshadow 時間: 2025-3-30 09:49 作者: BOOR 時間: 2025-3-30 13:04
Sorting Genomes with Insertions, Deletions and Duplications by DCJ,in one genome which are completely or partially unmatched in the other. The existence of unmatched gene ends introduces new kinds of paths in the adjacency graph, since some paths can now terminate internal to a chromosome and not on telomeres. We introduce òghost adjacenciesó to supply the missing 作者: Fracture 時間: 2025-3-30 20:21
,A Fast and Exact Algorithm for the Median of Three Problem—A Graph Decomposition Approach,g the median problem. In this paper, focusing on the median of three problem, we prove more important properties about adequate subgraphs with rank 3 and discuss the algorithms inventorying simple adequate subgraphs. After finding simple adequate subgraphs of small sizes, we incorporate them into AS作者: 邊緣 時間: 2025-3-30 22:35 作者: 奴才 時間: 2025-3-31 03:53
Sorting Cancer Karyotypes by Elementary Operations,errations in cancer. These aberrations, which result in abnormally structured genomes, became a hallmark of cancer. Many studies give evidence to the connection between chromosomal alterations and aberrant genes involved in the carcinogenesis process. An important problem in the analysis of cancer g作者: Constrain 時間: 2025-3-31 05:20 作者: 尖 時間: 2025-3-31 12:50 作者: 鋼筆記下懲罰 時間: 2025-3-31 15:53
Internal Validation of Ancestral Gene Order Reconstruction in Angiosperm Phylogeny,e multiplicity of solutions to the genome halving process. Using the genome of a related species (the outgroup) to guide the halving of a WGD descendant attenuates this problem. We investigate a battery of techniques for further improvement, including an unbiased version of the guided genome halving作者: BROTH 時間: 2025-3-31 19:12 作者: ALLEY 時間: 2025-3-31 22:31 作者: Palate 時間: 2025-4-1 04:48
