標題: Titlebook: Comparative Genomics; International Worksh Eric Tannier Conference proceedings 2010 Springer Berlin Heidelberg 2010 DCJ.DNA sequences.ances [打印本頁] 作者: Clientele 時間: 2025-3-21 16:26
書目名稱Comparative Genomics影響因子(影響力)
書目名稱Comparative Genomics影響因子(影響力)學科排名
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度學科排名
書目名稱Comparative Genomics被引頻次
書目名稱Comparative Genomics被引頻次學科排名
書目名稱Comparative Genomics年度引用
書目名稱Comparative Genomics年度引用學科排名
書目名稱Comparative Genomics讀者反饋
書目名稱Comparative Genomics讀者反饋學科排名
作者: Figate 時間: 2025-3-21 21:45 作者: Curmudgeon 時間: 2025-3-22 01:33 作者: Grating 時間: 2025-3-22 08:36
On Sorting Genomes with DCJ and Indels, algorithm to sort one genome into another one also using DCJ, insertions and deletions. The optimal sorting scenarios can have different compositions and we compare two types of sorting scenarios: one that maximizes and one that minimizes the number of DCJ operations with respect to the number of insertions and deletions.作者: 步兵 時間: 2025-3-22 09:31 作者: 施加 時間: 2025-3-22 16:11 作者: 施加 時間: 2025-3-22 18:11
A Simple Measure of the Dynamics of Segmented Genomes: An Application to Influenza,nalysis of 530 complete genomes of the H1N1 subtype, sampled over eleven years, shows that the proposed measure explains 58% of the variance in the prevalence of H1 influenza in the US population. The proposed measure, denoted ., could therefore improve influenza surveillance programs at a minimal cost.作者: Rinne-Test 時間: 2025-3-22 21:32
Der Sozialsektor und seine Akteure, common for all of them, a perspective that allows us for the first time to theoretically compare their running times. The paper also proposes an improved framework that empirically speeds up all known algorithms.作者: 或者發(fā)神韻 時間: 2025-3-23 03:46 作者: Innovative 時間: 2025-3-23 09:35
Zum Geltungsbereich sozio-kultureller Codes,exact NTRs built from the putative template motifs . and .. In this paper we describe an algorithm to solve this alignment problem in .(|... space and time. Our alignment algorithm is based on Fischetti?et al.’s wrap-around dynamic programming.作者: caldron 時間: 2025-3-23 13:28 作者: 觀察 時間: 2025-3-23 16:38
Listing All Parsimonious Reversal Sequences: New Algorithms and Perspectives, common for all of them, a perspective that allows us for the first time to theoretically compare their running times. The paper also proposes an improved framework that empirically speeds up all known algorithms.作者: 爭議的蘋果 時間: 2025-3-23 18:20 作者: dandruff 時間: 2025-3-23 23:13 作者: myocardium 時間: 2025-3-24 05:11
Limited Lifespan of Fragile Regions in Mammalian Evolution,ferent mammals, explaining why there exist only a few chromosomal breakpoints shared between different lineages. The birth and death of fragile regions phenomenon reinforces the hypothesis that rearrangements are promoted by matching segmental duplications and suggests putative locations of the currently active fragile regions in the human genome.作者: extinct 時間: 2025-3-24 08:09 作者: 被詛咒的人 時間: 2025-3-24 14:37
Zum Geltungsbereich sozio-kultureller Codes,nalysis of 530 complete genomes of the H1N1 subtype, sampled over eleven years, shows that the proposed measure explains 58% of the variance in the prevalence of H1 influenza in the US population. The proposed measure, denoted ., could therefore improve influenza surveillance programs at a minimal cost.作者: 刀鋒 時間: 2025-3-24 17:00
https://doi.org/10.1007/978-3-322-94247-0rithm was known, whereas the restricted halving problem was stated as open by Tannier, Zheng, and Sankoff. In this paper we address this constraint and show how to solve the problem of sorting in .(.log.) time and halving in .(. .) time.作者: 在前面 時間: 2025-3-24 21:57 作者: infinite 時間: 2025-3-25 03:13
Grenzen des sozio-kulturellen Codes,genome contains some genes which appear twice, even the one-sided scaffold filling problem becomes NP-complete. Finally, using the ideas for solving the two-sided scaffold filling problem under the breakpoint distance we show that the two-sided scaffold filling problem under the genomic/rearrangement distance is also polynomially solvable.作者: 表主動 時間: 2025-3-25 06:58
https://doi.org/10.1007/978-3-531-91312-4uses a simulation procedure based on random perturbations of the compared genomes. The scores presented in this paper are simple to implement and our results show that they allow to discriminate easily between robust and non-robust bacterial genome segmentations when using aligners such as MAUVE and MGA.作者: 連詞 時間: 2025-3-25 11:35 作者: OUTRE 時間: 2025-3-25 12:51
The Zero Exemplar Distance Problem, show that this problem admits a polynomial-time algorithm if only one of the two genomes has duplicate genes, and is fixed-parameter tractable if the parameter is the maximum number of chromosomes in each genome.作者: 逃避現(xiàn)實 時間: 2025-3-25 17:07
Scaffold Filling under the Breakpoint Distance,genome contains some genes which appear twice, even the one-sided scaffold filling problem becomes NP-complete. Finally, using the ideas for solving the two-sided scaffold filling problem under the breakpoint distance we show that the two-sided scaffold filling problem under the genomic/rearrangement distance is also polynomially solvable.作者: TOXIC 時間: 2025-3-25 21:24 作者: xanthelasma 時間: 2025-3-26 01:23 作者: dendrites 時間: 2025-3-26 07:35
Conference proceedings 2010Several papers tend to re?ne the models of genome evolution, and more and more genomic events can be modeled, from single nucleotide substitutions in whole genome alignments to large structural mutations or horizontal gene transfers.作者: 飲料 時間: 2025-3-26 11:17
Definitionsmacht sozio-kultureller Codes,ormalized) fraction of inconsistent quartets. For a problem on . species, our method requires .(. .) time, which is optimal with respect to the quartets input size. An application of our method to a dataset of 1128 genes from 11 cyanobacterial species, as well as to simulated datasets, illustrates t作者: BANAL 時間: 2025-3-26 16:20
https://doi.org/10.1007/978-3-531-91312-4istical significance for inferred phylogenies and lead to efficient and robust phylogenetic inference methods on large sets of taxa..We explore rearrangement phylogenetic patterns with respect to both the breakpoint distance and the DCJ distance. The latter has a simple formulation and well approxim作者: 羊齒 時間: 2025-3-26 18:59
Zum Konzept des sozio-kulturellen Codes,ution genomic data. We also describe a novel approach to estimate the robustness of results—an equivalent to the bootstrapping analysis used in sequence-based phylogenetic reconstruction. We present the results of extensive testing on both simulated and real data showing that our algorithm returns v作者: 縫紉 時間: 2025-3-26 21:25 作者: HALL 時間: 2025-3-27 04:35 作者: 提名的名單 時間: 2025-3-27 09:07
Detecting Highways of Horizontal Gene Transfer,ormalized) fraction of inconsistent quartets. For a problem on . species, our method requires .(. .) time, which is optimal with respect to the quartets input size. An application of our method to a dataset of 1128 genes from 11 cyanobacterial species, as well as to simulated datasets, illustrates t作者: 有發(fā)明天才 時間: 2025-3-27 12:07
On Exploring Genome Rearrangement Phylogenetic Patterns,istical significance for inferred phylogenies and lead to efficient and robust phylogenetic inference methods on large sets of taxa..We explore rearrangement phylogenetic patterns with respect to both the breakpoint distance and the DCJ distance. The latter has a simple formulation and well approxim作者: UTTER 時間: 2025-3-27 14:59
Fast and Accurate Phylogenetic Reconstruction from High-Resolution Whole-Genome Data and a Novel Roution genomic data. We also describe a novel approach to estimate the robustness of results—an equivalent to the bootstrapping analysis used in sequence-based phylogenetic reconstruction. We present the results of extensive testing on both simulated and real data showing that our algorithm returns v作者: Carbon-Monoxide 時間: 2025-3-27 18:34 作者: exigent 時間: 2025-3-27 22:25 作者: Hippocampus 時間: 2025-3-28 03:44
0302-9743 and more genomic events can be modeled, from single nucleotide substitutions in whole genome alignments to large structural mutations or horizontal gene transfers.978-3-642-16180-3978-3-642-16181-0Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: Somber 時間: 2025-3-28 06:26
Eric TannierUp to date results.Fast conference proceedings.State-of-the-art report作者: exacerbate 時間: 2025-3-28 14:08
Lecture Notes in Computer Sciencehttp://image.papertrans.cn/c/image/230911.jpg作者: 富足女人 時間: 2025-3-28 16:26 作者: opinionated 時間: 2025-3-28 21:58
978-3-642-16180-3Springer Berlin Heidelberg 2010作者: etiquette 時間: 2025-3-29 01:59
https://doi.org/10.1007/978-3-322-94247-0 polynomial time. We propose an aliquoting algorithm that is a 2-approximation for the genome aliquoting problem with double cut and join distance, improving upon the previous best solution to this problem, Feij?o and Meidanis’ 4-approximation algorithm.作者: 散布 時間: 2025-3-29 04:06 作者: 十字架 時間: 2025-3-29 10:29 作者: Pillory 時間: 2025-3-29 11:26
Der Sozialsektor und seine Akteure,e many minimum length sequences, another important topic has been the problem of listing all parsimonious sequences between two genomes, called the All Sorting Sequences by Reversals (ASSR) problem. In this paper, we revisit the ASSR problem for uni-chromosomal genomes when no duplications are allow作者: FOLLY 時間: 2025-3-29 15:38 作者: enflame 時間: 2025-3-29 19:55 作者: extemporaneous 時間: 2025-3-30 01:36
Vorurteile und sozio-kulturelle Codes, by deleting all but one copy of each gene in each genome. Blin, Fertin, Sikora, and Vialette recently proved that . for monochromosomal genomes is NP-hard even if each gene appears at most two times in each genome, thereby settling an important open question on genome rearrangement in the exemplar 作者: gangrene 時間: 2025-3-30 05:24
Grenzen des sozio-kulturellen Codes, an incomplete multichromosomal genome (or .) . with respect to a complete target genome . such that the resulting genomic distance between .′ and . is minimized, where .′ is the corresponding filled scaffold. We call this problem the . scaffold filling problem. In this paper, we follow Mu?oz et al.作者: 警告 時間: 2025-3-30 10:34
Zur Tiefenstruktur menschlicher Interaktion,te computational model that considers duplications, transfers and losses of genes. The model yields a fast and exact algorithm to infer time consistent and most parsimonious reconciliations. Then we study the conditions under which parsimony is able to accurately infer such events. Overall, it perfo作者: VEIL 時間: 2025-3-30 14:38
Definitionsmacht sozio-kultureller Codes,no more than a few genes are horizontally transferred between any two species. However, several studies identified pairs of species between which many different genes were horizontally transferred. Such a pair is said to be linked by a .. We present a method for inferring such highways. Our method i作者: 等級的上升 時間: 2025-3-30 16:46
https://doi.org/10.1007/978-3-531-91312-4combinatorial structures. By explicitly exploring these combinatorial structures, the recently developed adequate subgraph theory shows that a family of these structures, adequate subgraphs, are informative in finding the optimal solutions to the rearrangement median problem. Its extension gives ris作者: 好忠告人 時間: 2025-3-30 23:16 作者: 愛得痛了 時間: 2025-3-31 04:03 作者: objection 時間: 2025-3-31 05:30 作者: interrogate 時間: 2025-3-31 09:12
https://doi.org/10.1007/978-3-531-91312-4merous, less conserved, DNA fragments. Segmentation of bacterial genomes into backbone and variable regions is particularly useful to investigate bacterial genome evolution. Several software tools have been designed to compare complete bacterial chromosomes and a few online databases store pre-compu作者: LEVY 時間: 2025-3-31 14:43
Zum Geltungsbereich sozio-kultureller Codes,h one another. NTRs have been found in real DNA sequences and are expected to have applications for evolutionary studies, both as a tool to understand concerted evolution, and as a potential marker in population studies..In this paper we describe software tools developed for database searches for NT作者: FLACK 時間: 2025-3-31 18:34 作者: OVERT 時間: 2025-3-31 22:54
Makrosoziale und mikrosoziale Codes, located as far as 1 Mb from the transcription start site of the target gene and can regulate more than one gene. Therefore, proper characterization of functional interactions between long-range .-regulatory regions and their target genes remains problematic. We present a novel method to predict suc作者: 蹣跚 時間: 2025-4-1 03:25 作者: VAN 時間: 2025-4-1 06:16
