標(biāo)題: Titlebook: Comparative Genomics; 21st International C Celine Scornavacca,Maribel Hernández-Rosales Conference proceedings 2024 The Editor(s) (if appli [打印本頁(yè)] 作者: Novice 時(shí)間: 2025-3-21 16:34
書目名稱Comparative Genomics影響因子(影響力)
書目名稱Comparative Genomics影響因子(影響力)學(xué)科排名
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度學(xué)科排名
書目名稱Comparative Genomics被引頻次
書目名稱Comparative Genomics被引頻次學(xué)科排名
書目名稱Comparative Genomics年度引用
書目名稱Comparative Genomics年度引用學(xué)科排名
書目名稱Comparative Genomics讀者反饋
書目名稱Comparative Genomics讀者反饋學(xué)科排名
作者: 無(wú)能力 時(shí)間: 2025-3-21 23:40 作者: Eosinophils 時(shí)間: 2025-3-22 03:13
: ,econstruction of?,ary ,istories ,oospecies trees upon input and settles for a maximal subtree reconciliation in cases where noise or horizontal gene transfer precludes a global reconciliation. The accuracy of the tool is comparable to competing tools at substantially reduced computational cost. . is freely available at ..作者: 隼鷹 時(shí)間: 2025-3-22 07:00 作者: 種類 時(shí)間: 2025-3-22 12:24 作者: Intend 時(shí)間: 2025-3-22 16:00 作者: Intend 時(shí)間: 2025-3-22 20:35 作者: Repetitions 時(shí)間: 2025-3-22 21:31 作者: Induction 時(shí)間: 2025-3-23 01:36
Gene-Adjacency-Based Phylogenetics Under a?Stochastic Gain-Loss Modelariables, leading to a simple equation to estimate the model parameter and, consequently, the consistency of the phylogenetic reconstruction. Additionally, with a more straightforward representation, we can easily calculate the asymptotic variance of the parameter estimation, allowing us to obtain a作者: 輕率看法 時(shí)間: 2025-3-23 08:45
Gene Tree Parsimony in?the?Presence of?Gene Duplication, Loss, and?Incomplete Lineage Sortingraph-theoretic characterization and present a dynamic programming algorithm for this problem. Through an extensive evaluation study on a collection of simulated and empirical datasets, we compared our proposed GTP approaches with the leading methods in the field.作者: 使人煩燥 時(shí)間: 2025-3-23 12:18
Assessing the?Potential of?Gene Tree Parsimony for?Microbial Phylogenomicscs..In this work, we (i) design and implement the first GTP based approach, ., for microbial phylogenomics, (ii) use an extensive simulation study to systematically assess the accuracies of PhyloGTP and two other recently developed methods, SpeciesRax and ASTRAL-Pro-2, under a range of different con作者: sinoatrial-node 時(shí)間: 2025-3-23 14:30 作者: Spartan 時(shí)間: 2025-3-23 18:49
On the?Distribution of?Synteny Blocks Under a?Neutral Model of?Genome Dynamicsement arising from horizontal gene transfer between evolving species along a phylogenetic tree. We focus on synteny blocks, that is, strings of genes conserved across genomes and derive analytic expressions for the expected number of synteny blocks of a given size (or of maximal size) in terms of th作者: Curmudgeon 時(shí)間: 2025-3-23 22:11
Sampling Gene Adjacencies and?Geodesic Points of?Random Genomesfy the set of all adjacencies of . with respect to . into four distinct groups. For two unichromosomal random genomes of the same gene-content, namely . and ., as the number of genes tends to infinity, we study the limiting behaviour of the frequencies of adjacencies of each type in . with respect t作者: Urgency 時(shí)間: 2025-3-24 02:58 作者: 貿(mào)易 時(shí)間: 2025-3-24 09:17 作者: emission 時(shí)間: 2025-3-24 13:29 作者: Ancestor 時(shí)間: 2025-3-24 17:19 作者: peptic-ulcer 時(shí)間: 2025-3-24 19:15
https://doi.org/10.1007/978-981-15-2407-3ems: deciding whether one can add transfer edges to a tree to transform it into a galled PTN, and deciding whether a set of characters are galled-compatible, that is, they can be explained by some galled PTN.作者: 打火石 時(shí)間: 2025-3-25 00:16
Lecture Notes in Networks and Systemsonary histories. We present a progressive supertree construction algorithm that relies on a dynamic programming approach to infer a transcript phylogeny based on precomputed clusters of orthologous transcripts. A phylogeny is constructed iteratively by performing pairwise supertree construction at e作者: APNEA 時(shí)間: 2025-3-25 06:23
https://doi.org/10.1007/978-3-031-46874-2ariables, leading to a simple equation to estimate the model parameter and, consequently, the consistency of the phylogenetic reconstruction. Additionally, with a more straightforward representation, we can easily calculate the asymptotic variance of the parameter estimation, allowing us to obtain a作者: 移植 時(shí)間: 2025-3-25 08:01 作者: 口味 時(shí)間: 2025-3-25 13:36 作者: Intractable 時(shí)間: 2025-3-25 17:58
https://doi.org/10.1007/978-94-009-2425-3rgenic Reversals problem, which is a problem that takes into account both the gene order and the information present in the intergenic regions. We present an algorithm with a constant approximation factor for the . problem. Furthermore, we design an improved algorithm for the Sorting by Intergenic O作者: Insufficient 時(shí)間: 2025-3-25 22:59 作者: 肉體 時(shí)間: 2025-3-26 03:51
Andreas Bieler,Adam David Mortonfy the set of all adjacencies of . with respect to . into four distinct groups. For two unichromosomal random genomes of the same gene-content, namely . and ., as the number of genes tends to infinity, we study the limiting behaviour of the frequencies of adjacencies of each type in . with respect t作者: 人類學(xué)家 時(shí)間: 2025-3-26 05:58 作者: 路標(biāo) 時(shí)間: 2025-3-26 10:31
International Political Economy Seriesall three variants reside in potential translation bottlenecks and likely cause increased translation rates. These results support several hypotheses suggested by previous studies. To the best of our knowledge, this study is the first to apply a computational approach to examine the effects of MDR1 作者: flammable 時(shí)間: 2025-3-26 16:17
International Political Economy Seriesion to humans in the early gene ORF1ab compared to previous strains. In addition, our findings indicate that the observed differences in CUB scores were primarily attributed to non-synonymous mutations. This conclusion holds for additional human-infecting viruses.作者: 幸福愉悅感 時(shí)間: 2025-3-26 18:39 作者: Texture 時(shí)間: 2025-3-26 21:51
978-3-031-58071-0The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerl作者: 過(guò)去分詞 時(shí)間: 2025-3-27 01:41
https://doi.org/10.1007/978-981-19-6880-8, allowing for multiple crossover events. Thus, each SNP is assumed to have evolved under the infinite sites assumption down some tree inside the phylogenetic network. We prove that level-1 phylogenetic networks can be reconstructed uniquely from any set of SNPs that cover all bipartitions of the ro作者: micturition 時(shí)間: 2025-3-27 08:28
https://doi.org/10.1007/978-981-15-2407-3 useful for this task. Notably, . (PTN) explain the character diversity of a set of taxa for traits that are gained once, rarely lost, but that can be transferred laterally. Characterizing the structure of such characters is an important step towards understanding more complex characters. Although e作者: 財(cái)產(chǎn) 時(shí)間: 2025-3-27 09:46 作者: 最后一個(gè) 時(shí)間: 2025-3-27 15:59 作者: 母豬 時(shí)間: 2025-3-27 20:05
Volodymyr Babaev,Valeriy Shmukler,Yurii Krulplications and losses. . implements a new graph-based approach to identify orthogroups, orthology, and paralogy relationships first, and it uses this information in a second step to infer event-labeled gene trees and their reconciliation with an inferred species tree. It avoids using gene trees and 作者: AVID 時(shí)間: 2025-3-27 22:12
https://doi.org/10.1007/978-3-658-00523-8eage sorting (ILS) and gene duplication and loss (GDL). Gene tree parsimony (GTP) is a popular approach for estimating species trees that seeks to minimize the number of evolutionary events required to reconcile the species tree with gene trees. Minimizing gene duplication and loss (MGD and MGDL) ar作者: 黃油沒(méi)有 時(shí)間: 2025-3-28 04:02
Exploring social capital in Poland,, most existing methods for microbial phylogenomics can only make use of a small subset of the gene families present in the microbial genomes under consideration, potentially biasing their results and affecting their accuracy. One well-known approach for truly genome-scale phylogenomics is gene tree作者: abysmal 時(shí)間: 2025-3-28 07:08
https://doi.org/10.1007/978-94-009-2425-3ticular, graphs are structures widely used for the purpose of representing information retrieved from genomes. The breakpoint graph is a useful tool in this area because it allows representing in the same structure the gene orders of two genomes being compared. The maximum cycle decomposition of thi作者: Retrieval 時(shí)間: 2025-3-28 13:00 作者: Crepitus 時(shí)間: 2025-3-28 17:25 作者: BET 時(shí)間: 2025-3-28 19:56
International Political Economy Seriesy of high-quality predictions of protein three-dimensional structures (3D), has made it possible to use structural similarities for the inference of homology beyond what is possible from sequence analyses alone. This work explores the potential to use such 3D structures for the identification of TFs作者: insidious 時(shí)間: 2025-3-29 02:36 作者: Acetabulum 時(shí)間: 2025-3-29 03:41
International Political Economy Seriesto the host intracellular machinery, which occur over the evolution of the virus, and during the emergence of new viral strains with different properties. One aspect of viral adaptation is related to the efficiency of recruiting the host’s gene expression machinery and specifically the translation m作者: 不足的東西 時(shí)間: 2025-3-29 10:03 作者: 一起平行 時(shí)間: 2025-3-29 14:08 作者: BAN 時(shí)間: 2025-3-29 19:29 作者: Endometrium 時(shí)間: 2025-3-29 22:45
Statistically Consistent Estimation of?Rooted and?Unrooted Level-1 Phylogenetic Networks from?SNP Da, allowing for multiple crossover events. Thus, each SNP is assumed to have evolved under the infinite sites assumption down some tree inside the phylogenetic network. We prove that level-1 phylogenetic networks can be reconstructed uniquely from any set of SNPs that cover all bipartitions of the ro作者: anthesis 時(shí)間: 2025-3-30 01:05 作者: 獨(dú)白 時(shí)間: 2025-3-30 05:03
Inferring Transcript Phylogenies from?Transcript Ortholog Clustersscript isoforms from a gene. Recent studies have highlighted that the transcript isoforms of human genes are often conserved in orthologous genes from various species. The conserved transcripts are referred to as transcript orthologs, and the identification of transcript ortholog groups provides val作者: 衰弱的心 時(shí)間: 2025-3-30 09:13
Gene-Adjacency-Based Phylogenetics Under a?Stochastic Gain-Loss Model systematic resolution to provide a phylogenetic signal. However, among prokaryotes, events in genome dynamics (GD) such as gene gain in horizontal gene transfer (HGT) between organisms and gene loss seem to provide a quite sensitive signal. The synteny index (SI) marker captures differences between作者: SSRIS 時(shí)間: 2025-3-30 16:21
: ,econstruction of?,ary ,istories ,ooplications and losses. . implements a new graph-based approach to identify orthogroups, orthology, and paralogy relationships first, and it uses this information in a second step to infer event-labeled gene trees and their reconciliation with an inferred species tree. It avoids using gene trees and
