作者: 引起痛苦 時間: 2025-3-21 20:16 作者: Irascible 時間: 2025-3-22 02:33
Fast Multi-dimensional Approximate Pattern Matching,ains better than dynamic programming for . ≤ . ./(.(logσ . -logσ .)).. These are the first search algorithms for the problem. As side-effects we extend to d dimensions an already proposed algorithm for two-dimensional exact string matching, and we obtain a sublinear-time filter to search in . dimens作者: Herpetologist 時間: 2025-3-22 04:46 作者: 同步信息 時間: 2025-3-22 12:23
Anurag Kumar Verma,Saurabh Pal,Surjeet Kumarread of genes from each chromosome. We then prove a monotonicity property for the syntenic distance, and bound the difficulty of the hardest instance of any given size. We briefly discuss the results of implementing these algorithms and testing them on real synteny data.作者: 睨視 時間: 2025-3-22 16:36 作者: 睨視 時間: 2025-3-22 17:58 作者: aphasia 時間: 2025-3-22 22:02 作者: 荒唐 時間: 2025-3-23 02:20
On the Complexity of Positional Sequencing by Hybridization,ving the positional SBH problem when each substring has at most two possible positions. On the other hand, we prove that the problem is NP-complete if each substring has at most three possible positions.作者: GIST 時間: 2025-3-23 07:06 作者: hermetic 時間: 2025-3-23 12:32 作者: 我還要背著他 時間: 2025-3-23 15:10
Smart Innovation in Agriculturelowed by a simple search using the Shift-And algorithm. Moreover, the algorithm can be extended to the generalized pattern matching, to the pattern matching with . mismatches, and to the multiple pattern matching, like the Shift-And algorithm.作者: 缺乏 時間: 2025-3-23 19:34
https://doi.org/10.1007/978-981-16-7633-8to LZ78, we obtain a much more efficient search algorithm, which is faster than uncompressing the text and then searching on it. Finally, we propose a new hybrid compression scheme which is between LZ77 and LZ78, being in practice as good to compress as LZ77 and as fast to search in as LZ78.作者: Compass 時間: 2025-3-24 00:33 作者: anaphylaxis 時間: 2025-3-24 02:37 作者: 樸素 時間: 2025-3-24 08:15
Sudeshna Bhakat,Sivagami Periannanesentation of the whole image. Two applications of subsegments compression are more efficient automata-compressed pattern-matching and the first polynomial time algorithm for the fully compressed pattern-checking problem for weighted automata.作者: GEM 時間: 2025-3-24 11:27
Contributions to International Relationsror-free master sequence, where . and . are the lengths of the sequences. Our algorithm takes into account that the sample might contain up to α missing or double rings and suggests possible positions for these kind of inconsistencies. This is done by employing an . as the distance measure.作者: HILAR 時間: 2025-3-24 15:50 作者: 致命 時間: 2025-3-24 20:22 作者: synchronous 時間: 2025-3-25 01:56 作者: IST 時間: 2025-3-25 05:05
Finding Maximal Pairs with Bounded Gap, .(.). Since a tandem repeat is a pair where the gap is zero, our methods can be seen as a generalization of finding tandem repeats. The running time of our methods equals the running time of well known methods for finding tandem repeats.作者: Ringworm 時間: 2025-3-25 10:23
The Compression of Subsegments of Images Described by Finite Automata,esentation of the whole image. Two applications of subsegments compression are more efficient automata-compressed pattern-matching and the first polynomial time algorithm for the fully compressed pattern-checking problem for weighted automata.作者: 抗體 時間: 2025-3-25 12:29
Applying an Edit Distance to the Matching of Tree Ring Sequences in Dendrochronology,ror-free master sequence, where . and . are the lengths of the sequences. Our algorithm takes into account that the sample might contain up to α missing or double rings and suggests possible positions for these kind of inconsistencies. This is done by employing an . as the distance measure.作者: Hot-Flash 時間: 2025-3-25 16:58 作者: Spinous-Process 時間: 2025-3-25 20:04 作者: 舊式步槍 時間: 2025-3-26 03:22
Polamarasetty Anudeep,N. Krishna Prakashe can be produced in O(N) time using suffix trees for finding repetitions in trie, but for large data sets space requirements are more prohibitive than time so suffix arrays are used instead, with compression time complexity O(N log N) for all but for the largest data sets.作者: 獸群 時間: 2025-3-26 05:35 作者: Servile 時間: 2025-3-26 11:27
https://doi.org/10.1007/978-3-030-32861-0we present a practical heuristic algorithm for finding a matching between two sets of spots obtained by the two-dimensional gel electrophoresis technique, which is a special but important case of the problem.作者: Odyssey 時間: 2025-3-26 16:23
A New Indexing Method for Approximate String Matching,d and σ is the alphabet size. We experimentally show that this index outperforms by far all other algorithms for indexed approximate searching, also being the first experiments that compare the different existing schemes. We finally show how this index can be implemented using much less space.作者: 禍害隱伏 時間: 2025-3-26 17:26
Matching of Spots in 2D Electrophoresis Images. Point Matching Under Non-uniform Distortions,we present a practical heuristic algorithm for finding a matching between two sets of spots obtained by the two-dimensional gel electrophoresis technique, which is a special but important case of the problem.作者: Irritate 時間: 2025-3-27 00:29
Combinatorial Pattern Matching978-3-540-48452-3Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: 脆弱帶來 時間: 2025-3-27 04:01
0302-9743 Overview: 978-3-540-66278-5978-3-540-48452-3Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: 戰(zhàn)勝 時間: 2025-3-27 09:00
Smart Innovation in Agriculturee proposed recently by Crochemore et al. (1998). We show an algorithm which preprocesses a pattern of length . and an antidictionary . in .(. . + ‖.‖) time, and then scans a compressed text of length n in .(. + .) time to find all pattern occurrences, where ‖.‖ is the total length of strings in . and . is the number of the pattern occurrences.作者: implore 時間: 2025-3-27 10:06 作者: extemporaneous 時間: 2025-3-27 16:28 作者: Observe 時間: 2025-3-27 18:01 作者: Ledger 時間: 2025-3-28 01:32 作者: 云狀 時間: 2025-3-28 04:49 作者: OFF 時間: 2025-3-28 07:01
Xiumei Wang,Shaomin Mu,Aiju Shi,Zhongqi LinThe problem considered is that of determining the number of subsequences obtainable by deleting t symbols from a string of length . over an alphabet of size .. Recurrences are proven and solved for the maximum and average case values, and bounds on these values are exhibited.作者: 推崇 時間: 2025-3-28 12:15
Bounds on the Number of String Subsequences,The problem considered is that of determining the number of subsequences obtainable by deleting t symbols from a string of length . over an alphabet of size .. Recurrences are proven and solved for the maximum and average case values, and bounds on these values are exhibited.作者: 搜集 時間: 2025-3-28 14:39
https://doi.org/10.1007/3-540-48452-3Combinatorics; Complexity; DNA/RNA; Matching Algorithms; Pattern Matching; Sequences; data compression; pat作者: amorphous 時間: 2025-3-28 21:45 作者: Preserve 時間: 2025-3-29 02:32
Smart Innovation in Agriculturelgorithm is indeed fast when a pattern length is at most 32, or the word length. After an .(. + |.|) time and .(|.|) space preprocessing of a pattern, it scans an LZW compressed text in .(. + .) time and reports all occurrences of the pattern, where n is the compressed text length, . is the pattern 作者: Pert敏捷 時間: 2025-3-29 03:08 作者: 輕觸 時間: 2025-3-29 10:31 作者: quiet-sleep 時間: 2025-3-29 11:24 作者: CRANK 時間: 2025-3-29 16:40
Anurag Kumar Verma,Saurabh Pal,Surjeet Kumaryze an algorithmic strategy. We are following the research avenue proposed by Karp [9] on modeling the problem as a combinatorial problem - the Hypergraph Superstring Problem - intimately related to the Lander-Waterman stochastic model [16]. We show that a sparse version of the problem is MAXSNP-com作者: conflate 時間: 2025-3-29 22:10 作者: 會議 時間: 2025-3-30 01:58 作者: 種類 時間: 2025-3-30 06:29
Adityan Jothi,Shrinivas Jayarames.We allow the use of either of the two popular objectives, Tree Alignment or Sum-of-Pairs. The main distinguishing feature of our method is that the alignment is obtained via a tree in which the internal nodes (ancestors) are labeled by Steiner sequences for triples of the input sequences. Given l作者: Inflamed 時間: 2025-3-30 10:25 作者: 教義 時間: 2025-3-30 14:00
https://doi.org/10.1007/978-981-10-8968-8left and right without making them different. The gap of a pair is the number of characters between the two occurrences of the substring. In this paper we present methods for finding all maximal pairs under various constraints on the gap. In a string of length n we can find all maximal pairs with ga作者: Neutropenia 時間: 2025-3-30 19:07
https://doi.org/10.1007/978-981-10-8968-8crementally constructed in time and space linear in the string length. It is strongly related to sufix trees and sufix arrays, and may share applications with these existing structures. A sufix array can be built via the corresponding prefix list in linear time. Particular applications of the prefix作者: 群島 時間: 2025-3-30 22:13
Sudeshna Bhakat,Sivagami Periannanpattern. We analyze the resulting algorithm and show that the retrieval time is .(. .), for 0 < λ < 1, whenever ., where α is the error level tolerated and σ is the alphabet size. We experimentally show that this index outperforms by far all other algorithms for indexed approximate searching, also b作者: DEVIL 時間: 2025-3-31 04:27
Sudeshna Bhakat,Sivagami Periannanrson from a photo of a group of people. 2-dimensional compression is considered in terms of finite automata. Let . be the size of the smallest acyclic automaton which describes an image .. We show that the tight bound for the compression size of a subsegment (subimage) in the deterministic case is Θ作者: 考得 時間: 2025-3-31 06:13 作者: 過多 時間: 2025-3-31 10:53 作者: Aura231 時間: 2025-3-31 13:51
Contributions to International Relationsg widths in the sample to a dated master sequence. Assuming that a tree forms exactly one ring per year a simple sliding algorithm solves this matching task..But sometimes a tree produces no ring or even two rings in a year. If a sample sequence contains this kind of inconsistencies it cannot be dat作者: 狂怒 時間: 2025-3-31 17:34
https://doi.org/10.1007/978-3-031-44637-5 . errors (substitutions, insertions and deletions along any dimension). We use a novel and very flexible error model, for which there exists only an algorithm to evaluate the similarity between two elements in two dimensions at .(. .) time. We extend the algorithm to . dimensions, at .(.!. .) time 作者: 廢止 時間: 2025-4-1 01:19
Testing Overview of the EADN Samplesstructures such as secondary or tertiary structures by folding onto themselves. It is the RNA structures that determine the functions of RNA sequences. Since it is very difficult to crystallize and/or get nuclear magnetic resonance spectrum data for large RNA molecules, reliable methods to determine作者: Feedback 時間: 2025-4-1 02:35 作者: BINGE 時間: 2025-4-1 07:44
Shift-And Approach to Pattern Matching in LZW Compressed Text,lgorithm is indeed fast when a pattern length is at most 32, or the word length. After an .(. + |.|) time and .(|.|) space preprocessing of a pattern, it scans an LZW compressed text in .(. + .) time and reports all occurrences of the pattern, where n is the compressed text length, . is the pattern
