標題: Titlebook: Bioinformatics Research and Applications; 5th International Sy Ion M?ndoiu,Giri Narasimhan,Yanqing Zhang Conference proceedings 2009 Spring [打印本頁] 作者: Philanthropist 時間: 2025-3-21 19:47
書目名稱Bioinformatics Research and Applications影響因子(影響力)
書目名稱Bioinformatics Research and Applications影響因子(影響力)學科排名
書目名稱Bioinformatics Research and Applications網(wǎng)絡(luò)公開度
書目名稱Bioinformatics Research and Applications網(wǎng)絡(luò)公開度學科排名
書目名稱Bioinformatics Research and Applications被引頻次
書目名稱Bioinformatics Research and Applications被引頻次學科排名
書目名稱Bioinformatics Research and Applications年度引用
書目名稱Bioinformatics Research and Applications年度引用學科排名
書目名稱Bioinformatics Research and Applications讀者反饋
書目名稱Bioinformatics Research and Applications讀者反饋學科排名
作者: Oligarchy 時間: 2025-3-21 23:55 作者: Comedienne 時間: 2025-3-22 02:41
Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression,ding on the scientific question asked, discarding flawed data from a small experiment may be detrimental. Here we describe a novel quality assessment method that is designed to identify chips that should be discarded from an experiment. This technique simulates a set of differentially expressed gene作者: 搖擺 時間: 2025-3-22 07:54
Mean Square Residue Biclustering with Missing Data and Row Inversions,rtain thresholds and the missing values in the matrix are replaced with random numbers. In our previous paper we introduced the dual biclustering method with quadratic optimization to missing data and row inversions..In this paper, we modified the dual biclustering method with quadratic optimization作者: 帶來墨水 時間: 2025-3-22 12:43 作者: Allure 時間: 2025-3-22 14:32 作者: 硬化 時間: 2025-3-22 18:52
,Integrative Approach for Combining TNFα-NFκB Mathematical Model to a Protein Interaction Connectivinalytical approach. This integrative approach consists of a knowledgebase, model designing/visualization and simulation environments. In particular, our new TNFα-NFκB signaling pathway model was developed based on literature studies and the use of ordinary differential equations and a detailed prote作者: ALT 時間: 2025-3-22 21:29 作者: 水汽 時間: 2025-3-23 02:13 作者: 悄悄移動 時間: 2025-3-23 06:04
Untangling Tanglegrams: Comparing Trees by Their Drawings,ogy – to compare evolutionary histories of host and parasite species and to analyze genes of species in the same geographical area. We consider optimizations problems in tanglegram drawings. We show a linear time algorithm to decide if a tanglegram admits a planar embedding by a reduction to the pla作者: entrance 時間: 2025-3-23 12:45
An Experimental Analysis of Consensus Tree Algorithms for Large-Scale Tree Collections, Bayesian analyses produce results that can contain tens of thousands of trees to summarize. We develop a fast consensus algorithm called HashCS to construct large-scale consensus trees. We perform an extensive empirical study for comparing the performance of several consensus tree algorithms implem作者: 暖昧關(guān)系 時間: 2025-3-23 15:23 作者: Diverticulitis 時間: 2025-3-23 21:17
Relationship between Amino Acids Sequences and Protein Structures: Folding Patterns and Sequence Paequence identity among sequences have common sequence pattern. To find conserved positions and create a sequences pattern a new algorithm of the structure-based multiple sequences alignment was developed. An essential feature of the algorithm is that the alignment is based on residues that form hydr作者: 清澈 時間: 2025-3-24 01:29
Improved Algorithms for Parsing ESLTAGs: A Grammatical Model Suitable for RNA Pseudoknots,uctures. Two such grammars are Simple Linear Tree Adjoining Grammars (SLTAGs) and Extended SLTAGs (ESLTAGs). Performance of techniques that employ grammatical formalisms critically depend on the efficiency of the underlying parsing algorithms. In this paper we present efficient algorithms for parsin作者: TATE 時間: 2025-3-24 02:42
Efficient Algorithms for Self Assembling Triangular and Other Nano Structures,d inexpensive. Winfree [1] formalized a two dimensional (2D) tile assembly model based on Wang’s tiling technique. Algorithms with an optimal tile complexity of (.) were proposed earlier to uniquely self assemble an .×. square (with a temperature of .=?2) on this model. However efficient constructio作者: Aspirin 時間: 2025-3-24 06:34 作者: 暗諷 時間: 2025-3-24 12:43
Rearrangement Phylogeny of Genomes in Contig Form,coverage, there is an increasing number of genomes being published in contig form. Rearrangement algorithms, including gene order-based phylogenetic tools, require whole genome data on gene order, segment order, or some other marker order. Items whose chromosomal location is unknown cannot be part o作者: Crepitus 時間: 2025-3-24 15:23 作者: 物種起源 時間: 2025-3-24 21:26 作者: chandel 時間: 2025-3-25 01:01
Conference proceedings 2009t Lauderdale, FL, USA, in May 2009. The 26 revised full papers presented together four invited papers were carefully reviewed and selected from a total of 55submissions. The papers cover a wide range of topics, including clustering and classification, gene expression analysis, gene networks, genome 作者: 天賦 時間: 2025-3-25 04:48 作者: BLANK 時間: 2025-3-25 09:05 作者: 冷淡一切 時間: 2025-3-25 12:51 作者: Oscillate 時間: 2025-3-25 16:23 作者: 百科全書 時間: 2025-3-25 23:27 作者: 欄桿 時間: 2025-3-26 02:52
Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks,te regulatory networks by three methods using Bayesian network approach from an oxidative stress gene expression time course experiments. We show that better networks, identified by percentage of interactions between genes sharing at least one GO-Slim Biological Process terms, do indeed generate more predictive EMN’s.作者: 單挑 時間: 2025-3-26 07:52 作者: GRE 時間: 2025-3-26 12:26
An Experimental Analysis of Consensus Tree Algorithms for Large-Scale Tree Collections,es on 128 to 1,024 taxa. Experimental results show that our HashCS approach is up to 100 times faster than MrBayes and up to 9 times faster than PAUP*. Fast consensus algorithms such as HashCS can be used in a variety of ways, such as in real-time to detect whether a phylogenetic search has converged.作者: Nucleate 時間: 2025-3-26 12:44
Improved Algorithms for Parsing ESLTAGs: A Grammatical Model Suitable for RNA Pseudoknots, ever be made in the matrix M (that is normally used by TAG parsing algorithms). Our algorithm for ESLTAGs parsing takes .(. min {.,. .}) time and .( min {.,. .}) space. We show that these algorithms perform better in practice than the algorithms of Uemura, et al. [19].作者: 柔美流暢 時間: 2025-3-26 17:37 作者: RLS898 時間: 2025-3-26 21:04 作者: 方便 時間: 2025-3-27 02:23
https://doi.org/10.1007/978-3-663-06902-7 of transcription factor families, one can study co-evolution of DNA-binding proteins and the motifs they recognize. While this area is not yet ripe for fully automated analysis, the results of systematic comparative studies gradually start to coalesce into an understanding of how bacteria regulatory systems evolve.作者: Abominate 時間: 2025-3-27 06:39
https://doi.org/10.1007/978-3-663-06902-7approach is useful for combining heterogeneous expression data, while surprisingly, in experiments constrained to a single platform, biologically meaningful gene sets acting as sample features are often outperformed by random gene sets with no biological relevance.作者: VOK 時間: 2025-3-27 11:29 作者: 古代 時間: 2025-3-27 14:33
Zusammenfassung und Schlussfolgerungen,ns to assemble arbitrary shapes are not known and have remained open. In this paper we present self assembling algorithms to assemble a triangle of base 2.???1 (units) and height . with a tile complexity of .(log(.)). We also describe how this framework can be used to construct other shapes.作者: exhibit 時間: 2025-3-27 17:48
Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk), of transcription factor families, one can study co-evolution of DNA-binding proteins and the motifs they recognize. While this area is not yet ripe for fully automated analysis, the results of systematic comparative studies gradually start to coalesce into an understanding of how bacteria regulatory systems evolve.作者: Airtight 時間: 2025-3-27 22:53
Integrating Multiple-Platform Expression Data through Gene Set Features,approach is useful for combining heterogeneous expression data, while surprisingly, in experiments constrained to a single platform, biologically meaningful gene sets acting as sample features are often outperformed by random gene sets with no biological relevance.作者: 相反放置 時間: 2025-3-28 04:45
Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression,s and then assesses whether discarding each chip enhances or obscures the recovery of this known set. We compare our method to expert annotations derived using popular quality diagnostics and show, with examples, that the decision to discard a chip depends on the details of the particular experiment.作者: anthesis 時間: 2025-3-28 09:29 作者: 凝視 時間: 2025-3-28 13:11
0302-9743 s, genome analysis, motif finding, pathways, protein structure prediction, protein domain interactions, phylogenetics, and software tools.978-3-642-01550-2978-3-642-01551-9Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: 貧窮地活 時間: 2025-3-28 16:48 作者: Arthritis 時間: 2025-3-28 19:13
Zusammenfassung und Schlussfolgerungen, sequencing, SELEX yields large sets of affine sequences from which binding affinity models such as positional weight matrices (PWMs) can be estimated. The talk will describe some recent developments in identifying various affinity models from SELEX data.作者: Epidural-Space 時間: 2025-3-28 23:04
,Motif Construction from High–Throughput SELEX Data, sequencing, SELEX yields large sets of affine sequences from which binding affinity models such as positional weight matrices (PWMs) can be estimated. The talk will describe some recent developments in identifying various affinity models from SELEX data.作者: 老巫婆 時間: 2025-3-29 03:27 作者: flamboyant 時間: 2025-3-29 11:11 作者: Deduct 時間: 2025-3-29 15:19
, und Kaufpreiszahlung in , und ,,rge evolutionary distance to the closest assembled outgroup, very few methods have been published with a reconstruction of the amniote ancestral genome. This one is the first which is founded on a simple and formal methodological framework, whose good stability is shown and whose CARs cover large regions of the human and chicken genomes.作者: Fretful 時間: 2025-3-29 18:58
Hierarchical Organization of Functional Modules in Weighted Protein Interaction Networks Using Clus by GO annotations. Many significant functional modules are detected, most of which are corresponding to the known complexes. Moreover, our algorithm HC-Wpin is faster and more accurate compared to other previous algorithms. The program is available at http://bioinfo.csu.edu.cn/limin/HC-Wpin.作者: Concerto 時間: 2025-3-29 19:54 作者: 他很靈活 時間: 2025-3-30 01:39 作者: 臥虎藏龍 時間: 2025-3-30 04:49
Mean Square Residue Biclustering with Missing Data and Row Inversions,ntroduced by Cheng and Church in [4]. Since, missing data often occur in the given data matrices for biclustering, usually, missing data are filled by random numbers. However, we show that ignoring the missing data is a better approach and avoids additional noise caused by randomness. Since, an idea作者: 赤字 時間: 2025-3-30 09:23
Bioinformatics Challenges in Translational Research,. Data used for research resides in EMRs, LIMSs, CTMS, and other source systems. For example at the University of Miami, The Miller school and its affiliate Institutes (e.g., Jackson Hospital), have established a number of information systems to support various operational needs. These current syste作者: 搜集 時間: 2025-3-30 13:33
Untangling Tanglegrams: Comparing Trees by Their Drawings,oves the bound from earlier methods. We introduce a new optimization criterion using Spearman’s footrule optimization and give an .(..) algorithm..We also show integer programming formulations to quickly obtain tanglegram drawings that minimize the two optimization measures discussed. We prove lower作者: Androgen 時間: 2025-3-30 17:00 作者: Sleep-Paralysis 時間: 2025-3-30 21:55
Problemstellung und Gang der Handlung,ntroduced by Cheng and Church in [4]. Since, missing data often occur in the given data matrices for biclustering, usually, missing data are filled by random numbers. However, we show that ignoring the missing data is a better approach and avoids additional noise caused by randomness. Since, an idea作者: 解脫 時間: 2025-3-31 04:05 作者: 推崇 時間: 2025-3-31 08:19 作者: Arthr- 時間: 2025-3-31 10:25 作者: fleeting 時間: 2025-3-31 16:39
https://doi.org/10.1007/978-3-642-01551-9Clustering; DOM; amino acids sequences; bioinformatics; classification; computational biology; computation作者: misanthrope 時間: 2025-3-31 17:57
