標題: Titlebook: Algorithms in Bioinformatics; First International Olivier Gascuel,Bernard M. E. Moret Conference proceedings 2001 Springer-Verlag Berlin H [打印本頁] 作者: Affordable 時間: 2025-3-21 20:00
書目名稱Algorithms in Bioinformatics影響因子(影響力)
書目名稱Algorithms in Bioinformatics影響因子(影響力)學科排名
書目名稱Algorithms in Bioinformatics網(wǎng)絡(luò)公開度
書目名稱Algorithms in Bioinformatics網(wǎng)絡(luò)公開度學科排名
書目名稱Algorithms in Bioinformatics被引頻次
書目名稱Algorithms in Bioinformatics被引頻次學科排名
書目名稱Algorithms in Bioinformatics年度引用
書目名稱Algorithms in Bioinformatics年度引用學科排名
書目名稱Algorithms in Bioinformatics讀者反饋
書目名稱Algorithms in Bioinformatics讀者反饋學科排名
作者: 一起平行 時間: 2025-3-21 23:48 作者: 抵消 時間: 2025-3-22 02:44 作者: 搖曳 時間: 2025-3-22 05:49 作者: insightful 時間: 2025-3-22 10:07 作者: orthopedist 時間: 2025-3-22 12:57 作者: bypass 時間: 2025-3-22 17:21
Assessing the Statistical Significance of Overrepresented Oligonucleotides,problems how large deviation methodology applies. First, when some oligomer H occurs more often than expected, e.g. may be overrepresented, large deviations allow for a very efficient computation of the so-called . value. The second problem we address is the possible changes in the oligomers distrib作者: nonradioactive 時間: 2025-3-22 23:02
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies,educed to checking for subgraph isomorphism and finding maximal common subgraphs in a restricted class of ordered graphs. We have developed a subgraph isomorphism algorithm for ordered graphs, which performs well on the given set of data. The maximal common subgraph problem then is solved by repeate作者: 攤位 時間: 2025-3-23 01:30 作者: 你正派 時間: 2025-3-23 07:39 作者: Spinous-Process 時間: 2025-3-23 12:32
Finding a Maximum Compatible Tree for a Bounded Number of Trees with Bounded Degree Is Solvable in how that the problem can be solved in .(2. . .) time, where . is the number of taxa in each tree, and every node in every tree has at most . children. Hence, a maximum compatible tree for . unrooted trees can be found in in .(2. . .) time.作者: LINE 時間: 2025-3-23 15:59
Exact-IEBP: A New Technique for Estimating Evolutionary Distances between Whole Genomes,pportunities for discoveries about deep evolutionary rearrangement events, provided that sufficiently accurate methods can be developed to reconstruct evolutionary trees in these models [.,.,.,.]. A necessary component of any such method is the ability to accurately estimate the . between two genome作者: Spangle 時間: 2025-3-23 19:52
Finding an Optimal Inversion Median: Experimental Results,tremely large search tree using simple geometric properties of the problem and a newly available linear-time routine for inversion distance. Our experiments on simulated data sets indicate that the algorithm finds optimal medians in reasonable time for genomes of medium size when distances are not t作者: 織物 時間: 2025-3-23 23:24 作者: A精確的 時間: 2025-3-24 04:47
The Performance of Phylogenetic Methods on Trees of Bounded Diameter,tudy presents theoretically obtained convergence rates, as well as an empirical study based upon simulation of evolution on random birth-death trees. We find that the new phylogenetic methods offer an advantage over the neighbor-joining method, except at low rates of evolution where they have compar作者: uncertain 時間: 2025-3-24 08:49
,(1+ε)-Approximation of Sorting by Reversals and Transpositions,om the point of view of computational molecular biology, a more adequate objective function is obtained, if transpositions are given double weight. We present a (1 + ε)-approximation for this problem, based on the exact algorithm of Hannenhalli and Pevzner, for sorting by reversals only.作者: Terminal 時間: 2025-3-24 12:58
On the Practical Solution of the Reversal Median Problem,genomes, RMP calls for another genome such that the sum of the reversal distances between this genome and the given ones is minimized. So far, the problem was considered too complex to derive mathematical models useful for its practical solution. We use the graph theoretic relaxation of RMP that we 作者: 捐助 時間: 2025-3-24 17:12 作者: 敵手 時間: 2025-3-24 19:03 作者: 沉著 時間: 2025-3-25 03:05
S. Morbach,G. Rümenapf,R. Lobmann new method, ., for estimating the true evolutionary distance between two signed genomes. Our simulation study shows Exact-IEBP is a better estimation of true evolutionary distances. Furthermore, Exact-IEBP produces more accurate trees than IEBP when used with the popular distance-based method, neighbor joining [.].作者: 純樸 時間: 2025-3-25 05:17
Comparing a Hidden Markov Model and a Stochastic Context-Free Grammar,consider the related problem of finding a run through a hidden Markov model and derivation in a grammar that generate the same sequence and have maximal joint probability by a generalization of the C YK algorithm for parsing a sequence by a stochastic context-free grammar. We illustrate the methods by an experiment on RNA secondary structures.作者: freight 時間: 2025-3-25 08:23 作者: 敵手 時間: 2025-3-25 11:51
Exact-IEBP: A New Technique for Estimating Evolutionary Distances between Whole Genomes, new method, ., for estimating the true evolutionary distance between two signed genomes. Our simulation study shows Exact-IEBP is a better estimation of true evolutionary distances. Furthermore, Exact-IEBP produces more accurate trees than IEBP when used with the popular distance-based method, neighbor joining [.].作者: gusher 時間: 2025-3-25 18:44
https://doi.org/10.1007/3-540-27609-2ian distributions. Therefore, our work generalizes Yang’s solution. In addition, our derivation of the analytic solution is substantially simpler. We employ the Hadamard conjugation (Hendy and Penny, 1993) and convexity of an entropy-like function.作者: 大看臺 時間: 2025-3-25 22:07 作者: 斗爭 時間: 2025-3-26 03:43 作者: 展覽 時間: 2025-3-26 04:58
The Performance of Phylogenetic Methods on Trees of Bounded Diameter,We find that the new phylogenetic methods offer an advantage over the neighbor-joining method, except at low rates of evolution where they have comparable performance. The improvement in performance of the new methods over neighbor-joining increases with the number of taxa and the rate of evolution.作者: Outspoken 時間: 2025-3-26 12:01
An Improved Model for Statistical Alignment,nction approach is introduced to describe the multiple insertion process. The presented algorithm computes the approximate joint probability of two sequences in .(. .) running time where . is the geometric mean of the sequence lengths.作者: 四指套 時間: 2025-3-26 13:55 作者: Matrimony 時間: 2025-3-26 17:00
False Positives in Genomic Map Assembly and Sequence Validation,e positive probability bound, we show that the probability of failure to compute the correct map can be limited to acceptable levels if the input map error rates satisfy certain sharply delineated conditions. Thus careful experimental design must be used to ensure that whole genome map assembly can be done quickly and reliably.作者: 破譯密碼 時間: 2025-3-26 21:47
Assessing the Statistical Significance of Overrepresented Oligonucleotides,ution induced by the over-representation of some pattern. Discarding this noise allows for the detection of weaker signals. Related algorithmic and complexity issues are discussed and compared to previous results. The approach is illustrated with three typical examples of applications on biological data.作者: Entirety 時間: 2025-3-27 04:50 作者: Assignment 時間: 2025-3-27 08:32 作者: 留戀 時間: 2025-3-27 11:06
Die Erfindung der erz?hlten Weltnction approach is introduced to describe the multiple insertion process. The presented algorithm computes the approximate joint probability of two sequences in .(. .) running time where . is the geometric mean of the sequence lengths.作者: 推遲 時間: 2025-3-27 15:54
https://doi.org/10.1007/978-3-476-03380-2tperforms the commonly used average scoring and dot product approach on a fold recognition benchmark. The score is also applicable to the problem of aligning two multiple alignments since every multiple alignment induces a frequency profile.作者: 處理 時間: 2025-3-27 21:19 作者: 詞匯記憶方法 時間: 2025-3-28 00:26 作者: 弓箭 時間: 2025-3-28 05:51 作者: 吵鬧 時間: 2025-3-28 08:02
Versorgungsstrukturen in der Zukunft,developed in a previous paper [.], essentially calling for a perfect matching in a graph that forms the maximum number of cycles jointly with . given perfect matchings, to design effective algorithms for its exact and heuristic solution. We report the solution of a few hundred instances associated with real-world genomes.作者: Abrade 時間: 2025-3-28 13:19
Olivier Gascuel,Bernard M. E. MoretIncludes supplementary material: 作者: 暫停,間歇 時間: 2025-3-28 16:20 作者: Deceit 時間: 2025-3-28 21:05 作者: 脆弱吧 時間: 2025-3-28 23:25 作者: 任意 時間: 2025-3-29 05:13 作者: 串通 時間: 2025-3-29 08:26 作者: Eulogy 時間: 2025-3-29 13:10
https://doi.org/10.1007/978-3-476-05764-8We develop fast algorithms for computing the linking number of a simplicial complex within a filtration. We give experimental results in applying our work toward the detection of non-trivial tangling in biomolecules, modeled as alpha complexes.作者: Nomogram 時間: 2025-3-29 17:11 作者: 容易懂得 時間: 2025-3-29 21:47
Computing Linking Numbers of a Filtration,We develop fast algorithms for computing the linking number of a simplicial complex within a filtration. We give experimental results in applying our work toward the detection of non-trivial tangling in biomolecules, modeled as alpha complexes.作者: Folklore 時間: 2025-3-30 03:38 作者: 6Applepolish 時間: 2025-3-30 07:52
Finding a Maximum Compatible Tree for a Bounded Number of Trees with Bounded Degree Is Solvable in how that the problem can be solved in .(2. . .) time, where . is the number of taxa in each tree, and every node in every tree has at most . children. Hence, a maximum compatible tree for . unrooted trees can be found in in .(2. . .) time.作者: nettle 時間: 2025-3-30 10:08 作者: meditation 時間: 2025-3-30 16:21 作者: 核心 時間: 2025-3-30 17:54 作者: artless 時間: 2025-3-30 22:14 作者: Conflagration 時間: 2025-3-31 04:06 作者: vasculitis 時間: 2025-3-31 08:49
Von Regeln, Spielen und Strategienive locations to the probes along the genome. The method depends on several hybridization experiments: in each experiment, we sample (with replacement) a large library of BACs to select a small collection of BACs for hybridization with the probe arrays. The resulting data can be used to assign a loc作者: Oration 時間: 2025-3-31 10:57 作者: 有幫助 時間: 2025-3-31 17:00 作者: 冷峻 時間: 2025-3-31 18:38 作者: debunk 時間: 2025-3-31 22:33 作者: 鋼筆尖 時間: 2025-4-1 04:14 作者: 胎兒 時間: 2025-4-1 06:37
S. Zimny,U. Waldecker,A. Eckardthow that the problem can be solved in .(2. . .) time, where . is the number of taxa in each tree, and every node in every tree has at most . children. Hence, a maximum compatible tree for . unrooted trees can be found in in .(2. . .) time.作者: 空氣傳播 時間: 2025-4-1 13:27
S. Morbach,G. Rümenapf,R. Lobmannpportunities for discoveries about deep evolutionary rearrangement events, provided that sufficiently accurate methods can be developed to reconstruct evolutionary trees in these models [.,.,.,.]. A necessary component of any such method is the ability to accurately estimate the . between two genome作者: STELL 時間: 2025-4-1 17:44 作者: 左右連貫 時間: 2025-4-1 21:46
https://doi.org/10.1007/3-540-27609-2 symmetric model of substitution. For identically distributed rates per site this is probably the simplest phylogenetic estimation problem, and it is readily solved numerically. Analytic solutions, on the other hand, were obtained only recently (Yang, 2000)..In this work we provide analytic solution作者: 范圍廣 時間: 2025-4-2 01:54
Versorgungsstrukturen in der Zukunft,tudy presents theoretically obtained convergence rates, as well as an empirical study based upon simulation of evolution on random birth-death trees. We find that the new phylogenetic methods offer an advantage over the neighbor-joining method, except at low rates of evolution where they have compar作者: 不利 時間: 2025-4-2 03:43
Versorgungsstrukturen in der Zukunft,om the point of view of computational molecular biology, a more adequate objective function is obtained, if transpositions are given double weight. We present a (1 + ε)-approximation for this problem, based on the exact algorithm of Hannenhalli and Pevzner, for sorting by reversals only.
