標(biāo)題: Titlebook: Algorithms in Bioinformatics; 12th International W Ben Raphael,Jijun Tang Conference proceedings 2012 Springer-Verlag Berlin Heidelberg 201 [打印本頁] 作者: palliative 時間: 2025-3-21 18:53
書目名稱Algorithms in Bioinformatics影響因子(影響力)
書目名稱Algorithms in Bioinformatics影響因子(影響力)學(xué)科排名
書目名稱Algorithms in Bioinformatics網(wǎng)絡(luò)公開度
書目名稱Algorithms in Bioinformatics網(wǎng)絡(luò)公開度學(xué)科排名
書目名稱Algorithms in Bioinformatics被引頻次
書目名稱Algorithms in Bioinformatics被引頻次學(xué)科排名
書目名稱Algorithms in Bioinformatics年度引用
書目名稱Algorithms in Bioinformatics年度引用學(xué)科排名
書目名稱Algorithms in Bioinformatics讀者反饋
書目名稱Algorithms in Bioinformatics讀者反饋學(xué)科排名
作者: FAZE 時間: 2025-3-21 22:08 作者: 細(xì)查 時間: 2025-3-22 00:24
Allgemeine physiologische Betrachtungen,triplets: For every .?≥?3, if . is an incompatible set of more than .???1 triplets over . labels, then some proper subset of . is incompatible. We show this bound is tight by exhibiting, for every .?≥?3, a set of .???1 triplets over . taxa such that . is incompatible, but every proper subset of . is作者: VEN 時間: 2025-3-22 04:38
Reducing Problems in Unrooted Tree Compatibility to Restricted Triangulations of Intersection Graph continuing literature on graph triangulations, which has been exploited to create algorithms that are efficient in practice for a variety of Perfect-Phylogeny problems. Our reduction allows us to frame the compatibility problem as a minimal triangulation problem (in particular, as a chordal graph s作者: 種族被根除 時間: 2025-3-22 11:51 作者: BANAL 時間: 2025-3-22 15:56
Improved Lower Bounds on the Compatibility of Quartets, Triplets, and Multi-state Characters,triplets: For every .?≥?3, if . is an incompatible set of more than .???1 triplets over . labels, then some proper subset of . is incompatible. We show this bound is tight by exhibiting, for every .?≥?3, a set of .???1 triplets over . taxa such that . is incompatible, but every proper subset of . is作者: 為寵愛 時間: 2025-3-22 18:26
Preserving Inversion Phylogeny Reconstruction,reconstruct the ancestral gene orders in phylogenies of several .-Proteobacteria species and Burkholderia strains, respectively. We prove in addition that the large parsimony problem (where the phylogeny is output) remains NP-complete.作者: Defiance 時間: 2025-3-22 23:52 作者: osteocytes 時間: 2025-3-23 05:18
Space-Efficient and Exact de Bruijn Graph Representation Based on a Bloom Filter, Bloom filter, with an additional structure to remove critical false positives. An assembly software implementing this structure, Minia, performed a complete . assembly of human genome short reads using 5.7 GB of memory in 23 hours.作者: agitate 時間: 2025-3-23 07:55
Conference proceedings 2012ms and machine-learning methods that address important problems in molecular biology. The 35 full papers presented were carefully reviewed and selected from 92 submissions. The papers include algorithms for a variety of biological problems including phylogeny, DNA and RNA sequencing and analysis, protein structure, and others.作者: largesse 時間: 2025-3-23 12:51 作者: Neutral-Spine 時間: 2025-3-23 17:21 作者: hematuria 時間: 2025-3-23 20:13
https://doi.org/10.1007/978-3-531-92078-8 where .. and .. are the number of nodes and .. and .. are the maximum node degrees in the input trees . and ., respectively. This maintains (and slightly improves) the time complexity of previous, less general algorithms for the problem. ...作者: 爭議的蘋果 時間: 2025-3-23 23:07
https://doi.org/10.1007/978-3-322-89776-3” set of isoforms. We show through simulations that, on a single sample, CLIIQ provides better results in isoform identification and quantification to alternative popular tools. More importantly, CLIIQ has an option to jointly analyze multiple samples, which significantly outperforms other tools in both isoform identification and quantification.作者: 恃強(qiáng)凌弱的人 時間: 2025-3-24 03:06
https://doi.org/10.1007/978-3-642-86110-9 genomic reads can be compared to obtain reference-free predictions of splice junctions that have high overlap with results from more standard reference-based methods..Code to construct and compare the BWT of large genomic data sets is available at . as part of the . library.作者: 檔案 時間: 2025-3-24 08:34
Reconstructing the Evolution of Molecular Interaction Networks under the DMC and Link Dynamics Modeobserved differences between networks, and (2) reconstructing ancestral networks from extant ones. We address both issues computationally under the . and . (DMC) evolutionary models. We demonstrate the utility and accuracy of our methods on biological and simulated data.作者: 不連貫 時間: 2025-3-24 10:40 作者: 出來 時間: 2025-3-24 17:12 作者: 藐視 時間: 2025-3-24 19:10 作者: 凹室 時間: 2025-3-25 01:43 作者: Coordinate 時間: 2025-3-25 04:40
Das Schicksal beinamputierter alter Menschenreconstruct the ancestral gene orders in phylogenies of several .-Proteobacteria species and Burkholderia strains, respectively. We prove in addition that the large parsimony problem (where the phylogeny is output) remains NP-complete.作者: Predigest 時間: 2025-3-25 11:14
https://doi.org/10.1007/978-3-642-56524-3isting algorithms. We also identify issues with partition distance, the traditional method for assessing the quality of estimated sibship partitionings. We prefer an information theoretic alternative called variation of information, which takes into account the degree to which misplaced individuals harm sibship structures.作者: 珍奇 時間: 2025-3-25 11:48
Der Aufbau und die Funktionen des Herzens, Bloom filter, with an additional structure to remove critical false positives. An assembly software implementing this structure, Minia, performed a complete . assembly of human genome short reads using 5.7 GB of memory in 23 hours.作者: ACRID 時間: 2025-3-25 17:26 作者: 沉積物 時間: 2025-3-25 23:13
https://doi.org/10.1007/978-3-531-92078-8ty in ., where . (resp. .) is the structure (resp. sequence) length, and the exponent . depends on the family of structures. For each family considered by previous approaches, our contribution specializes into an algorithm whose complexity either matches or outperforms previous solutions.作者: 墻壁 時間: 2025-3-26 03:45
Tree Decomposition and Parameterized Algorithms for RNA Structure-Sequence Alignment Including Tertty in ., where . (resp. .) is the structure (resp. sequence) length, and the exponent . depends on the family of structures. For each family considered by previous approaches, our contribution specializes into an algorithm whose complexity either matches or outperforms previous solutions.作者: 一個攪動不安 時間: 2025-3-26 06:50
Conference proceedings 2012nia, in September 2012. WABI 2012 is one of six workshops which, along with the European Symposium on Algorithms (ESA), constitute the ALGO annual meeting and focuses on algorithmic advances in bioinformatics, computational biology, and systems biology with a particular emphasis on discrete algorith作者: 發(fā)炎 時間: 2025-3-26 09:43
0302-9743 s in molecular biology. The 35 full papers presented were carefully reviewed and selected from 92 submissions. The papers include algorithms for a variety of biological problems including phylogeny, DNA and RNA sequencing and analysis, protein structure, and others.978-3-642-33121-3978-3-642-33122-0Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: 鴿子 時間: 2025-3-26 15:07 作者: forebear 時間: 2025-3-26 17:36 作者: insert 時間: 2025-3-26 22:14 作者: 起波瀾 時間: 2025-3-27 02:38 作者: 灰姑娘 時間: 2025-3-27 09:21 作者: 寬敞 時間: 2025-3-27 11:05
Acta Neurovegetativa Supplementaof both multibit trees and fingerprint databases by applying these data structures. Experiments revealed that memory usage in our representations was much smaller than that of the standard pointer-based representation. Moreover, our representations enabled us to efficiently perform PubChem-scale similarity searches.作者: 流行 時間: 2025-3-27 14:31 作者: LAITY 時間: 2025-3-27 19:49 作者: 過于光澤 時間: 2025-3-27 22:35 作者: Distribution 時間: 2025-3-28 05:22 作者: 大方不好 時間: 2025-3-28 08:10
,-TRIMAX: Extracting Triclusters and Analysing Coregulation in Time Series Gene Expression Data, affirmation score to measure the performance of our triclustering algorithm for an artificial dataset. To show biological significance of the triclusters we have conducted GO enrichment analysis. We have also performed enrichment analysis of transcription factor binding sites to establish coregulation of a group of coexpressed genes.作者: Project 時間: 2025-3-28 11:22 作者: 考博 時間: 2025-3-28 17:45 作者: Tracheotomy 時間: 2025-3-28 21:13
Fast Phylogenetic Tree Reconstruction Using Locality-Sensitive Hashing,y a Markov model of evolution. Due to rapid expansion in sequence databases, such very fast algorithms are necessary. Other fast heuristics have been developed for building trees from large alignments [18,1], but they lack theoretical performance guarantees. Our new algorithm runs in .(..log..) time作者: indignant 時間: 2025-3-28 23:46 作者: 暗諷 時間: 2025-3-29 04:46
SibJoin: A Fast Heuristic for Half-Sibling Reconstruction, particularly in endangered populations. Although many solutions exist for reconstructing full-sibling relationships, few exist for half-siblings. We present SibJoin, a heuristic-based clustering approach based on Mendelian genetics, which is reasonably accurate and thousands of times faster than ex作者: 我們的面粉 時間: 2025-3-29 07:20 作者: FLAGR 時間: 2025-3-29 11:33
Estimating Population Size via Line Graph Reconstruction, haplotypes between individuals and is based on transforming the graph of potential haplotype sharing into a line graph using a minimum number of edge and vertex deletions. We show that the problems are NP complete and provide exact integer programming solutions for them. We test our approach using 作者: ILEUM 時間: 2025-3-29 16:38
Extracting Conflict-Free Information from Multi-labeled Trees,conflicting phylogenetic relationships for the same set of taxa, but can also contain conflict-free information that is of interest and yet is not obvious. We define the information content of a MUL-tree . as the set of all conflict-free quartet topologies implied by . , and define the maximal reduc作者: geometrician 時間: 2025-3-29 23:14 作者: ETHER 時間: 2025-3-30 00:51
An Optimal Reconciliation Algorithm for Gene Trees with Polytomies,ee with a species tree, and interpreting the incongruence between the two trees as evidence of duplication and loss. In the case of binary rooted trees, linear-time algorithms have been developed for the duplication, loss, and mutation (duplication + loss) costs. However, a strict prerequisite to re作者: 逢迎春日 時間: 2025-3-30 07:20 作者: Eulogy 時間: 2025-3-30 10:13
RNA Tree Comparisons via Unrooted Unordered Alignments,he . problem, and present a new algorithm which applies to several modes, including global or local, ordered or unordered, and rooted or unrooted tree alignments. Our algorithm generalizes previous algorithms that either solved the problem in an asymmetric manner, or were restricted to the rooted an作者: 試驗 時間: 2025-3-30 16:19 作者: TIA742 時間: 2025-3-30 20:08 作者: 賠償 時間: 2025-3-30 22:51
CLIIQ: Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population,Unfortunately, from a computational perspective, identification and quantification of a gene’s isoforms from RNA-Seq data remains to be a non-trivial problem. We propose CLIIQ, a novel computational method for identification and quantification of expressed isoforms from . in a .. Motivated by ideas 作者: Oversee 時間: 2025-3-31 01:00
Improved Lower Bounds on the Compatibility of Quartets, Triplets, and Multi-state Characters,n .(.) such that, for any set . of .-state characters, . is compatible if and only if every subset of .(.) characters of . is compatible. We show that for every .?≥?2, there exists an incompatible set . of ..-state characters such that every proper subset of . is compatible. Thus, . for every .?≥?2.作者: Ventilator 時間: 2025-3-31 05:56 作者: 簡略 時間: 2025-3-31 09:41 作者: slipped-disk 時間: 2025-3-31 16:50
Succinct de Bruijn Graphs,ented in 4.?+?.(.) bits. This is much smaller than existing ones. The numbers of outgoing and incoming edges of a node are computed in constant time, and the outgoing and incoming edge with given label are found in constant time and . time, respectively. The data structure is constructed in . time u作者: 別名 時間: 2025-3-31 20:14 作者: Pert敏捷 時間: 2025-4-1 00:26 作者: GREEN 時間: 2025-4-1 02:38
Algorithms in Bioinformatics978-3-642-33122-0Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: conscribe 時間: 2025-4-1 08:23
Erratum zu: Der andere Anti-Demenz-Ratgeber,ented in 4.?+?.(.) bits. This is much smaller than existing ones. The numbers of outgoing and incoming edges of a node are computed in constant time, and the outgoing and incoming edge with given label are found in constant time and . time, respectively. The data structure is constructed in . time using no additional space.作者: propose 時間: 2025-4-1 12:58
Das Schicksal beinamputierter alter Menschenony problem (inferring ancestral genomes given a phylogeny on an arbitrary number of genomes) in the case gene orders are permutations, that evolve by inversions not breaking common gene intervals, and these intervals are organised in a linear structure. We present two examples where this allows to 作者: 露天歷史劇 時間: 2025-4-1 15:52
